2023

• Hájková N, Bártů MK, Cibula D, Drozenová J, Fabian P, Fadare O, Frühauf F, Hausnerová J, Hojný J, Krkavcová E, Laco J, Lax SF, Matěj R, Méhes G, Michálková R, Němejcová K, Singh N, Stolnicu S, Švajdler M, Zima T, McCluggage WG, Stružinská I, Dundr P. Microsatellite instability in non-endometrioid ovarian epithelial tumors: a study of 400 cases comparing immunohistochemistry, PCR, and NGS based testing with mutation status of MMR genes. Transl Res. 2023 Oct;260:61-68. doi: 10.1016/j.trsl.2023.05.004. Epub 2023 May 25. PMID: 37244485. EF16_013/0001674 and cz reg. no. LM2023033. (IF 2021=10.171, Q1, D1)
• Němejcová K, Bártů MK, Michálková R, Drozenová J, Fabian P, Fadare O, Hausnerová J, Laco J, Matěj R, Méhes G, Singh N, Stolnicu S, Škapa P, Švajdler M, Stružinská I, Cibula D, Kocian R, Lax SF, McCluggage WG, Dundr P. A comprehensive immunohistochemical analysis of IMP2 and IMP3 in 542 cases of ovarian tumors. Diagn Pathol. 2023 Feb 6;18(1):15. doi: 10.1186/s13000-023-01300-4. PMID: 36740684; PMCID: PMC9901072. EF16_013/0001674 and cz reg. no. LM2023033. (IF 2021: 3.196, Q3)
• Němejcová K, Šafanda A, Bártů MK, Michálková R, Drozenová J, Fabian P, Hausnerová J, Laco J, Matěj R, Méhes G, Škapa P, Stružinská I, Dundr P. A comprehensive immunohistochemical analysis of 26 markers in 250 cases of serous ovarian tumors. Diagn Pathol. 2023 Feb 28;18(1):32. doi: 10.1186/s13000-023-01317-9. PMID: 36855066; PMCID: PMC9972686. EF16_013/0001674 and cz reg. no. LM2023033. (IF 2021: 3.196, Q3)
• Hrudka J, Prouzová Z, Kendall Bártů M, Hojný J, Čapka D, Zavillová N, Matěj R, Waldauf P, Immune cell infiltration, tumour budding, and the p53 expression pattern are important predictors in penile squamous cell carcinoma: a retrospective study of 152 cases. Pathology. 2023 Aug;55(5):637-649. doi: 10.1016/j.pathol.2023.03.010. Epub 2023 May 22. PMID: 37316384. EF16_013/0001674 and cz reg. no. LM2018125. (IF 2021: 5.335, Q1)
• Jakša R, Stružinská I, Kendall Bártů M, Trča S, Matěj R, Dundr P. Clear cell stromal tumor of the lung with multinucleated giant cells: a report of a case with YAP1-TFE3 fusion. Diagn Pathol. 2023 Jan 27;18(1):9. doi: 10.1186/s13000-023-01304-0. PMID: 36707859; PMCID: PMC9881279. EF16_013/0001674 and BBMRI_CZ LM2018125 (IF 2021: 3.196, Q3)
• Kendall Bártů M, Němejcová K, Michálková R, Bui QH, Drozenová J, Fabian P, Fadare O, Hausnerová J, Laco J, Matěj R, Méhes G, Šafanda A, Singh N, Škapa P, Špůrková Z, Stolnicu S, Švajdler M, Stružinská I, Lax SF, McCluggage WG, Dundr P. Neuroendocrine Marker Expression in Primary Non-neuroendocrine Epithelial Tumors of the Ovary: A Study of 551 Cases. Int J Gynecol Pathol. 2024 Mar 1;43(2):123-133. doi: 10.1097/PGP.0000000000000962. Epub 2023 Jun 14. PMID: 37406366. EF16_013/0001674 and BBMRI_CZ LM2018125 (IF 2021: 3.326, JIF i JCI Q2)
• Dundr P, Hájková N, Bártů M, Cibula D, Drozenová J, Fabian P, Fadare O, Frühauf F, Hausnerová J, Hojný J, Laco J, Lax SF, Matěj R, Méhes G, Michálková R, Němejcová K, Singh N, Stolnicu S, Švajdler M, Zima T, McCluggage WG, Stružinská I. Refined criteria for p53 expression in ovarian mucinous tumors are highly concordant with TP53 mutation status, but p53 expression/TP53 status lack prognostic signifikance. Pathology 2023 Oct; 55(6):785-791. doi: 10.1016/j.pathol.2023.04.008. Epub 2023 Jul 11. PMID: 37500307. EF16_013/0001674 and BBMRI_CZ LM2023033 (IF 2021: 5.335; Q1)
• Kendall Bártů M, Němejcová K, Michálková R, Stružinská I, Hájková N, Hojný J, Krkavcová E, Laco J, Matěj R, Drozenová J, Méhes G, Fabian P, Hausnerová J, Švajdler M, Škapa P, Cibula D, Zima T, Dundr P. HER2 status as a potential predictive biomarker for ovarian clear cell carcinoma. Virchows Arch. 2023 Oct;483(4):497-507. doi: 10.1007/s00428-023-03640-4. Epub 2023 Sep 7. PMID: 37676270. EF16_013/0001674 and BBMRI_CZ LM2023033 (IF 2022/23: 3.5; Q2)
• Šafanda A, Kendall Bártů M, Michálková R, Stružinská I, Drozenová J, Fabián P, Hausnerová J, Laco J, Matěj R, Škapa P, Švajdler M, Špůrková Z, Méhes G, Dundr P, Němejcová K. Immunohistochemical expression of PRAME in 485 cases of epithelial tubo-ovarian tumors. Virchows Arch. 2023 Oct;483(4):509-516. doi: 10.1007/s00428-023-03629-z. Epub 2023 Aug 23. PMID: 37610627. EF16_013/0001674 and BBMRI_CZ LM2023033 (IF 2022/23: 3,5; Q2)
• Dundr P, Machado-Lopez A, Mas A, Věcková Z, Mára M, Richtárová A, Matěj R, Stružinská I, Kendall Bártů M, Němejcová K, Dvořák J, Hojný J. Uterine leiomyoma with RAD51B::NUDT3 fusion: a report of 2 cases. Virchows Arch. 2023 Jul 19. doi: 10.1007/s00428-023-03603-9. Online ahead of print. PMID: 37466765. EF16_013/0001674 and BBMRI_CZ LM2023033 (IF 2022/23: 3.5; Q2)
• Stružinská I, Hájková N, Hojný J, Krkavcová E, Michálková R, Dvořák J, Němejcová K, Matěj R, Laco J, Drozenová J, Fabian P, Hausnerová J, Méhes G, Škapa P, Švajdler M, Cibula D, Frühauf F, Bártů MK, Dundr P. A comprehensive molecular analysis of 113 primary ovarian clear cell carcinomas reveals common therapeutically significant aberrations. Diagn Pathol. 2023 Jun 12;18(1):72. doi: 10.1186/s13000-023-01358-0. PMID: 37303048; PMCID: PMC10259037. EF16_013/0001674 and BBMRI_CZ LM2023033 (IF 2022: 2.6, Q3)
• Vrkoslav V, Smeringaiova I, Smorodinova N, Svobodova A, Strnad S, Jackson CJ, Burkert J, Jirsova K. Quantification of Analgesic and Anti-Inflammatory Lipid Mediators in Long-Term Cryopreserved and Freeze-Dried Preserved Human Amniotic Membrane. Bioengineering (Basel). 2023 Jun 20;10(6):740. doi: 10.3390/bioengineering10060740. PMID: 37370671; PMCID: PMC10294941. BBMRI_CZ LM2023033 (IF 2022: 4.6 Q2)
• Svobodova A, Horvath V, Balogh L, Zemlickova M, Fiala R, Burkert J, Brabec M, Stadler P, Lindner J, Bednar J, Jirsova K. Outcome of Application of Cryopreserved Amniotic Membrane Grafts in the Treatment of Chronic Nonhealing Wounds of Different Origins in Polymorbid Patients: A Prospective Multicenter Study. Bioengineering (Basel). 2023 Jul 29;10(8):900. doi: 10.3390/bioengineering10080900. PMID: 37627785; PMCID: PMC10451957. BBMRI_CZ LM2023033 (IF 2022: 4.6 Q2)
• Svobodova A, Vrkoslav V, Smeringaiova I, Jirsova K. Distribution of an analgesic palmitoylethanolamide and other N-acylethanolamines in human placental membranes. PLoSOne. 2023 Jan 13;18(1):e0279863. doi: 10.1371/journal.pone.0279863. PMID: 36638082; PMCID: PMC9838831. BBMRI_CZ LM2018125 (IF 2022: 3.7 Q2)
• Horvath V, Svobodova A, Cabral JV, Fiala R, Burkert J, Stadler P, Lindner J, Bednar J, Zemlickova M, Jirsova K. Inter-placental variability is not a major factor affecting the healing efficiency of amniotic membrane when used for treating chronic non-healing wounds. Cell Tissue Bank. 2023 Dec;24(4):779-788. doi: 10.1007/s10561-023-10096-y. Epub 2023 May 25. PMID: 37227562; PMCID: PMC10616215. BBMRI_CZ LM2018125 (IF 2022: 1.5 Q4)
• Kral J, Jelinkova S, Zemankova P, Vocka M, Borecka M, Cerna L, Cerna M, Dostalek L, Duskova P, Foretova L, Havranek O, Horackova K, Hovhannisyan M, Chvojka S, Kalousova M, Kosarova M, Koudova M, Krutilkova V, Machackova E, Nehasil P, Novotny J, Otahalova B, Puchmajerova A, Safarikova M, Slama J, Stranecky V, Subrt I, Tavandzis S, Zikan M, Zima T, Soukupova J, Kleiblova P, Kleibl Z, Janatova M. Germline multigene panel testing of patients with endometrial cancer. Oncol Lett. 2023 Apr 12;25(6):216. doi: 10.3892/ol.2023.13802. PMID: 37153042; PMCID: PMC10157349. LM2023033. (IF 2022: 2.9, Q3)
• Neřoldová M, Ciara E, Slatinská J, Fraňková S, Lišková P, Kotalová R, Globinovská J, Šafaříková M, Pfeiferová L, Zůnová H, Mrázová L, Stránecký V, Vrbacká A, Fabián O, Sticová E, Skanderová D, Šperl J, Kalousová M, Zima T, Macek M, Pawlowska J, Knisely AS, Kmoch S, Jirsa M. Exome sequencing reveals IFT172 variants in patients with non-syndromic cholestatic liver disease. PLoS One. 2023 Jul 20;18(7):e0288907. doi: 10.1371/journal.pone.0288907. PMID: 37471416; PMCID: PMC10358992. LM2018125, EF16_013/0001674 (IF 2022: 3.7, Q2)
• Burgetova A, Dusek P, Uher T, Vaneckova M, Vejrazka M, Burgetova R, Horakova D, Srpova B, Kalousova M, Noskova L, Levova K, Krasensky J, Lambert L. CSF Markers of Oxidative Stress Are Associated with Brain Atrophy and Iron Accumulation in a 2-Year Longitudinal Cohort of Early MS. Int J Mol Sci. 2023 Jun 12;24(12):10048. doi: 10.3390/ijms241210048. PMID: 37373196. cz reg. no. LM2023033. (IF 2022:5,6, Q1)
• Kuchar O, Petrackova M, Kalousova M, Noskova L, Zima T, Fialova L. Levels and avidities of antiphosphatidylethanolamine antibodies in patients with thrombotic events and immunologically-mediated diseases. Biomed Pap Med Fac Univ Palacky Olomouc Czech Repub. 2023 Sep;167(3):254-262. doi: 10.5507/bp.2022.003. Epub 2022 Feb 11.PMID: 35147138. BBMRI-CZ LM2018125 (IF 2022: 0.9, Q4).
• Franková V, Svozilová H, Stránecký V, Kozubík KS, Srovnal J, Benešová L, Uvírová M, Macek M, Pospíšilová Š. Ethical principles for usage and sharing of genomic data from research [Etické zásady pro používání a sdílení genomických dat z výzkumu]. Čas Lék čes. 2022; 161: 271-175. BBMRI-CZ (no. LM2018125), bez IF

2022

• Dundr P, Bártů M, Bosse T, Bui QH, Cibula D, Drozenová J, Fabian P, Fadare O, Hausnerová J, Hojný J, Hájková N, Jakša R, Laco J, Lax SF, Matěj R, Méhes G, Michálková R, Šafanda A, Němejcová K, Singh N, Stolnicu S, Švajdler M, Zima T, Stružinská I, McCluggage WG. Primary Mucinous Tumors of the Ovary: An Interobserver Reproducibility and Detailed Molecular Study Reveals Significant Overlap Between Diagnostic Categories. Mod Pathol. 2023 Jan;36(1):100040. doi: 10.1016/j.modpat.2022.100040. PMID: 36788074., EF16_013/0001674, BBMRI_CZ LM2018125 (IF 2021: 8,209, Q1, decil 1)
• Dundr P, Bazalová B, Bártů M, Bosse T, Drozenová J, Fabian P, Fadare O, Hausnerová J, Jakša R, Laco J, Lax SF, Matěj R, McCluggage WG, Méhes G, Michálková R, Němejcová K, Singh N, Stolnicu S, Škapa P, Švajdler M, Stružinská I. The cytokeratin 17 expression in primary ovarian tumors has diagnostic but not prognostic significance. Virchows Arch. 2022 Aug;481(2):201-212. doi: 10.1007/s00428-022-03338-z. Epub 2022 May 13. PMID: 35554675. EF16_013/0001674, BBMRI_CZ LM2018125 (IF 2021: 4,548, Q2)
• Dundr P, Drozenová J, Matěj R, Bártů M, Němejcová K, Robová H, Rob L, Hojný J, Stružinská I. Desmoplastic Small Round Cell Tumor of the Uterus: A Report of Molecularly Confirmed Case with EWSR1-WT1 Fusion. Diagnostics (Basel). 2022 May 10;12(5):1184. doi: 10.3390/diagnostics12051184. PMID: 35626339; PMCID: PMC9140206. EF160_13/0001674 and BBMRI_CZ LM2018125 (IF 2021: 3.992, Q2)
• Hojny J, Michalkova R, Krkavcova E, Bui QH, Bartu M, Nemejcova K, Kalousova M, Kleiblova P, Dundr P, Struzinska I. Comprehensive quantitative analysis of alternative splicing variants reveals the HNF1B mRNA splicing pattern in various tumour and non-tumour tissues. Sci Rep. 2022 Jan 7;12(1):199. doi: 10.1038/s41598-021-03989-z. PMID: 34997048; PMCID: PMC8741901. EF160_13/0001674 and BBMRI_CZ LM2018125 (IF 2021: 4.997, Q2)
• Reinstein Merjava S, Kossl J, Neuwirth A, Skalicka P, Hlinomazova Z, Holan V, Jirsova K. Presence of Protease Inhibitor 9 and Granzyme B in Healthy and Pathological Human Corneas. Biology (Basel). 2022 May 23;11(5):793. doi: 10.3390/biology11050793. PMID: 35625521; PMCID: PMC9138262. BBMRI_CZ LM 2018125, EF16_013/0001674 (IF 2021: 5.168, Q1)
• Trosan P, Cabral JV, Smeringaiova I, Studeny P, Jirsova K. Interleukin-13 increases the stemness of limbal epithelial stem cells cultures. PLoS One. 2022 Aug 2;17(8):e0272081. doi: 10.1371/journal.pone.0272081. PMID: 35917378; PMCID: PMC9345474. BBMRI_CZLM2018125, (IF 2021: 3.752, Q2)
• Svobodova A, Horvath V, Smeringaiova I, Cabral JV, Zemlickova M, Fiala R, Burkert J, Nemetova D, Stadler P, Lindner J, Bednar J, Jirsova K. The healing dynamics of non-healing wounds using cryo-preserved amniotic membrane. Int Wound J. 2022 Aug;19(5):1243-1252. doi: 10.1111/iwj.13719. Epub 2021 Nov 17. PMID: 34791774; PMCID: PMC9284646. BBMRI_CZLM2018125, (IF 2021: 3.099, Q2)
• Jirsova K, Levova K, Kalousova M, Fales I, Frankova V, Vesela V, Zima T, Utheim TP, Bednar J. Time and Temperature Stability of TGF-β1, EGF and IGF-1 in 20% and 100% Human Serum. Folia Biol (Praha). 2022;68(2):45-49. PMID: 36384261. BBMRI_CZ LM 2018125, EF16_013/0001674, (IF 2021: 1.167 Q3)
• Křížová Ľ, Šafaříková M, Kalousová M, Pfeiferová L, Kuběna AA, Vočka M, Ulrych J, Franková V, Petruželka L, Zima T, Feltl D. New methodology of TMB assessment from tissue and liquid biopsy in NSCLC. PLoS One. 2022 Sep 26;17(9): e0275121. doi: 10.1371/journal.pone.0275121. PMID: 36155654; PMCID: PMC9512185. LM2018125, BBMRI‑CZ EF16_013/0001674, (IF 2021: 3.752, Q2)
• Hrabák P, Šoupal J, Kalousová M, Krechler T, Vočka M, Hanuš T, Petruželka L, Svačina Š, Žák A, Zima T. Novel biochemical markers for non-invasive detection of pancreatic cancer. Neoplasma. 2022 Mar;69(2):474-483. doi: 10.4149/neo_2022_210730N1075. Epub 2022 Feb 10.PMID: 35144477 BBMRI-CZ LM2018125, (IF 2021: 3.409, Q3)
• Kuchar O, Petrackova M, Kalousova M, Noskova L, Zima T, Fialova L. Levels and avidities of antiphosphatidylethanolamine antibodies in patients with thrombotic events and immunologically-mediated diseases.Biomed Pap Med Fac Univ Palacky Olomouc Czech Repub. 2023 Sep;167(3):254-262. doi: 10.5507/bp.2022.003. Epub 2022 Feb 11. PMID: 35147138, BBMRI-CZ LM2018125, (IF 2021: 1.648, Q4)
• Fialová L, Nosková L, Kalousová M, Zima T, Uher T, Bartoš A. Analytické a preanalytické aspekty stanovení lehkých řetězců neurofilament v biologických tekutinách. Cesk Slov Neurol N 2022; 85(1): 11-16. doi: 10.48095/cccsnn202211, CZ.02.1.01/0.0/0.0/18_046/0015959, BBMRI_CZ LM2018125, (IF 2021: 0.35, Q4)
• Pfeiferova L, Safarikova M Ulrych J, Krska Z, Frankova V, Zima T, Kalousova M. Circulating Cell-Free DNA Extraction form Liquid Biopsy for Cancer Research. Folia Biol (Praha) 2022;68,153-157. BBMRI-CZ EF16_013/0001674, LM2018125, MH CZ DRO VFN 64165, Cooperatio Laboratory Diagnostics, (IF 2021: 1.167, Q4)
• Franková V, Svozilová H, Stránecký V, Kozubík KS, Srovnal J, Benešová L, Uvírová M, Macek M, Pospíšilová Š. Ethical principles for .the usage and sharing of genomic data from research [Etické zásady pro používání a sdílení genomických dat z výzkumu]. Cas Lek Cesk. 2023 Winter;161(7-8):271-275. English. PMID: 36868836. BBMRI-CZ LM2018125

2021

• Strohalmová S, Levová K, Kuběna AA, Krška Z, Hoskovec D, Zima T, Kalousová M. The effect of surgery on the levels of matrix metalloproteinases in patients with inguinal hernia. Physiol Res. 2021 Aug 31;70(4):627-634. doi: 10.33549/physiolres.934625. Epub 2021 Jun 1. PMID: 34062071; PMCID: PMC8820539, European Regional Development Fund project [EF16_013/0001674] IF (2020):1.881
• Smeringaiova I, Utheim TP, Jirsova K. Ex vivo expansion and characterization of human corneal endothelium for transplantation: a review. Stem Cell Res Ther. 2021 Oct 30;12(1):554. doi: 10.1186/s13287-021-02611-3. PMID: 34717745; PMCID: PMC8556978. BBMRICZ_EF16_013/0001674, (IF 2021:8.081, Q1)
• Dundr P, Gregová M, Hojný J, Krkavcová E, Michálková R, Němejcová K, Bártů M, Hájková N, Laco J, Mára M, Richtárová A, Zima T, Stružinská I. Uterine cellular leiomyomas are characterized by common HMGA2 aberrations, followed by chromosome 1p deletion and MED12 mutation: morphological, molecular, and immunohistochemical study of 52 cases. Virchows Arch. 2022 Feb;480(2):281-291. doi: 10.1007/s00428-021-03217-z. Epub 2021 Oct 9. PMID: 34626221. European Regional Development Fund (CZ .02.1.01/0.0/0.0/18_046/0015959; BBMRI_CZ LM2018125 (IF 2021: 4.548, Q2)
• Safarikova M, Kubena AA, Frankova V, Zima T, Kalousova The Effects of Different Storage Conditions and Repeated Freeze/Thaw Cycles on the Concentration, Purity and Integrity of Genomic DNA. Folia Biol (Praha). 2021;67(1):10-15. PMID: 34273262. The study was supported by the European Regional Development Fund, projects BBMRI-CZ EF16_013/0001674 and A-C-G-T CZ.02.1.01/0.0/0.0/16_026/0008448; MEYS, RDI infrastructure, project No. LM2018125; MH CZ DRO VFN 64165 and Progres Q25. IF 2021: 1.167, Q4
• Němejcová K, Bártů M, Hojný J, Hájková N, Michálková R, Krkavcová E, Stružinská I, Bui HQ, Dundr P, Cibula D, Jirsová K. A comprehensive analysis of the expression, epigenetic and genetic changes of HNF1B and ECI2 in 122 cases of high-grade serous ovarian carcinoma. Oncol Lett. 2021 Mar;21(3):185. doi: 10.3892/ol.2021.12446. Epub 2021 Jan 6. PMID: 33574924; PMCID: PMC7816296. EF16_013/0001674, BBMRI_CZ LM2018125. IF: 2.311 (2020)
• Jirsova K, Vesela V, Skalicka P, Ruzickova E, Glezgova J, Zima T, Dusinska M, Collins A, Bednar J. The micronucleus cytome assay - A fast tool for DNA damage screening in human conjunctival epithelial cells. Ocul Surf. 2021 Apr;20:195-198. doi: 10.1016/j.jtos.2021.02.011. Epub 2021 Mar 4. PMID: 33677062. BBMRI_CZ LM2018125 (IF 2021: 925, Q1)
• Dundr P, Singh N, Nožičková B, Němejcová K, Bártů M, Stružinská I. Primary mucinous ovarian tumors vs. ovarian metastases from gastrointestinal tract, pancreas and biliary tree: a review of current problematics. Diagn Pathol. 2021 Mar 11;16(1):20. doi: 10.1186/s13000-021-01079-2. PMID: 33706757; PMCID: PMC7953678. BBMRI_CZ LM2018125, (IF2021=3.196, Q3)

2020

• Dundr P, Bártů M, Hojný J, Michálková R, Hájková N, Stružinská I, Krkavcová E, Hadravský L, Kleissnerová L, Kopejsková J, Hiep BQ, Němejcová K, Jakša R, Čapoun O, Řezáč J, Jirsová K, Franková V. HNF1B, EZH2 and ECI2 in prostate carcinoma. Molecular, immunohistochemical and clinico-pathological study. Sci Rep. 2020 Sep 1;10(1):14365. doi: 10.1038/s41598-020-71427-7. PMID: 32873863; PMCID: PMC7463257. EF16_013/0001674, BBMRI_CZ LM2018125. (IF 2020: 4.379, Q2)
• Bártů M, Hojný J, Hájková N, Michálková R, Krkavcová E, Hadravský L, Kleissnerová L, Bui QH, Stružinská I, Němejcová K, Čapoun O, Šlemendová M, Dundr P. Analysis of expression, epigenetic, and genetic changes of HNF1B in 130 kidney tumours. Sci Rep. 2020 Oct 13;10(1):17151. doi: 10.1038/s41598-020-74059-z. PMID: 33051485; PMCID: PMC7555858. EF16_013/0001674, BBMRI_CZ LM2018125. (IF 2020: 4.379, Q2)
• Němejcová K, Dundr P, Jakša R, Bártů M, Stružinská I, Hojný J, Hájková N, Kodet O. Comprehensive Analysis of PTEN in Primary Cutaneous Melanoma. Folia Biol (Praha). 2020;66(1):7-16. PMID: 32512654. EF16_013/0001674. IF 2019: 0.691
• Cabral JV, Jackson CJ, Utheim TP, Jirsova K. Ex vivo cultivated oral mucosal epithelial cell transplantation for limbal stem cell deficiency: a review. Stem Cell Res Ther. 2020 Jul 21;11(1):301. doi: 10.1186/s13287-020-01783-8. PMID: 32693830; PMCID: PMC7374839. EF16_013/0001674, BBMRI_CZ LM2018125. (IF 2020: 6.832, Q1)
• Dundr P, Věcková Z, Tichá I, Hojný J, Němejcová K, Bártů M. Microscopic extraovarian sex cord proliferation: report of a case with bilateral Fallopian tube involvement and a comprehensive molecular analysis. Pol J Pathol. 2020;71(2):175-180. doi:10.5114/pjp.2020.97023. PMID: 32729308. EF16_013/0001674, BBMRI_CZ LM2018125. IF 0,664 (2019)
• Hojny J, Bartu M, Krkavcova E, Nemejcova K, Sevcik J, Cibula D, Fryba V, Plincelnerova L, Dundr P, Struzinska I. Identification of novel HNF1B mRNA splicing variants and their qualitative and semi-quantitative profile in selected healthy and tumour tissues. Sci Rep. 2020 Apr 24;10(1):6958. doi: 10.1038/s41598-020-63733-x. PMID: 32332782; PMCID: PMC7181708. Project EF16_013/0001674, BBMRI_ CZ LM2018125. (IF 2020: 4.379, Q2)
• Dundr P, Gregová M, Němejcová K, Bártů M, Hájková N, Hojný J, Stružinská I, Fischerová D. Ovarian mesonephric-like adenocarcinoma arising in serous borderline tumor: a case report with complex morphological and molecular analysis. Diagn Pathol. 2020 Jul 21;15(1):91. doi: 10.1186/s13000-020-01012-z. PMID: 32693840; PMCID: PMC7372838. BBMRI_ CZ LM2018125, IF 2.528 (2019)
• Jirsova K, Seidler Stangova P, Palos M, Mahelkova G, Kalasova S, Rybickova I, Utheim TP, Vesela V. Aberrant HLA-DR expression in the conjunctival epithelium after autologous serum treatment in patients with graft-versus-host disease or Sjögren's syndrome. PLoS One. 2020 Apr 21;15(4):e0231473. doi: 10.1371/journal.pone.0231473. PMID: 32315325; PMCID: PMC7173771.LM2015089, IF 776
• Micera A, Jirsova K, Esposito G, Balzamino BO, Di Zazzo A, Bonini S. Mast Cells Populate the Corneoscleral Limbus: New Insights for Our Understanding of Limbal Microenvironment. Invest Ophthalmol Vis Sci. 2020 Mar 9;61(3):43. doi: 10.1167/iovs.61.3.43. PMID: 32207813; PMCID: PMC7401584. BBMRI_CZ LM2015089, Progres-Q25 (KJ) (IF 2020: 4.799, Q1)
• Smirnov E, Trosan P, Cabral JV, Studeny P, Kereïche S, Jirsova K, Cmarko D. Discontinuous transcription of ribosomal DNA in human cells. PLoS One. 2020 Mar 2;15(3):e0223030. doi: 10.1371/journal.pone.0223030. PMID: 32119673; PMCID: PMC7051091. (BBMRI_CZ LM2018125, EF16_013/ 0001674, the Grant Agency of Czech Republic (19-21715S) and by Charles University (Progres Q25 a Q28) IF 776

2019

• Soukup V, Capoun O, Pesl M, Vavrova L, Sobotka R, Levova K, Hanus T, Zima T, Kalousova M. The significance of calprotectin, CD147, APOA4 and DJ-1 in non-invasive detection of urinary bladder carcinoma. Neoplasma. 2019 Nov;66(6):1019-1023. doi: 10.4149/neo_2019_190124N74. Epub 2019 Oct 8. PMID: 31607136. LM2015089, BBMRI-CZ III, EF16_013/0001674, IF 1.771
• Vočka M, Langer A, Frýba D, Petrtýl J, Hanuš T, Kalousová M, Zima T, Petruželka L. Serum levels of TIMP-1 and MMP-7 as potential biomarkers in patients with metastatic colorectal cancer. Int J Biol Markers. 2019 Sep;34(3):292-301. doi: 10.1177/1724600819866202. Epub 2019 Sep 4. (LM2015089, Progres Q28/LF1, MH CZ DRO VFN 64165). IF: 1.767
• Stadnikova A, Trosan P, Skalicka P, Utheim TP, Jirsova K. Interleukin-13 maintains the stemness of conjunctival epithelial cell cultures prepared from human limbal explants. PLoS One. 2019 Feb 11;14(2):e0211861. doi: 10.1371/journal.pone.0211861. eCollection 2019. PubMed PMID: 30742646; PubMed Central PMCID: PMC6370187. (NFI, Progres, BBMRI_CZ LM2015089, BBMRI-CZ III, EF16_013/0001674) IF: 2.740
• Hájková N, Tichá I, Hojný J, Němejcová K, Bártů M, Michálková R, Zikán M, Cibula D, Laco J, Geryk T, Méhes G, Dundr P. Synchronous endometrioid endometrial and ovarian carcinomas are biologically related: A clinico-pathological and molecular (next generation sequencing) study of 22 cases. Oncol Lett. 2019; 17(2):2207-2214. doi: 10.3892/ol.2018.9855. (BBMRI‑CZ No. EF16_013/0001674) IF: 2.311
• Němejcová K, Tichá I, Bártů M, Kodet O, Důra M, Jakša R, Michálková R, Dundr P. Comparison of five different scoring methods in the evaluation of inflammatory infiltration (tumor-infiltrating lymphocytes) in superficial spreading and nodular melanoma. Pigment Cell Melanoma Res. 2019 May;32(3):412-423. doi: 10.1111/pcmr.12757 (LM2015089) IF: 3.683
• Skálová H, Hájková N, Majerová B, Bártů M, Povýšil C, Tichá I. Impact of chemotherapy on the expression of claudins and cadherins in invasive breast cancer. Exp Ther Med. 2019 Oct;18(4):3014-3024. doi: 10.3892/etm.2019.7930 (European Regional Development Fund - project no. BBMRI‑CZ; grant no. EF16_013/0001674). IF: 1.785
• Gregová M, Hojný J, Němejcová K, Bártů M, Mára M, Boudová B, Laco J, Krbal L, Tichá I, Dundr P. Leiomyoma with Bizarre Nuclei: a Study of 108 Cases Focusing on Clinicopathological Features, Morphology, and Fumarate Hydratase Alterations. Pathol Oncol Res. 2020 Jul;26(3):1527-1537. doi: 10.1007/s12253-019-00739-5. Epub 2019 Aug 31. PMID: 31471882. (European Regional Development Fund, project EF16_013/0001674 and BBMRI_CZ LM2015089) IF: 2.826
• Dundr P, Cibula D, Němejcová K, Tichá I, Bártů M, Jakša R. Pathologic Protocols for Sentinel Lymph Nodes Ultrastaging in Cervical Cancer. Arch Pathol Lab Med. 2019 Dec 23. doi: 10.5858/arpa.2019-0249-RA. Epub ahead of print. PMID: 31869245. EF16_013/0001674. IF: 4.094

2018

• Trosan P, Smeringaiova I, Brejchova K, Bednar J, Benada O, Kofronova O, Jirsova K. The enzymatic de-epithelialization technique determines denuded amniotic membrane integrity and viability of harvested epithelial cells. PLoS One. 2018 Mar 27;13(3):e0194820. doi: 10.1371/journal.pone.0194820. eCollection 2018. PubMed PMID: 29584778; PubMed Central PMCID: PMC5870984. (NFI, Progres, LM2015089, BBMRI-CZ III, EF16_013/0001674) IF: 2.776
• Azqueta A, Rundén-Pran E, Elje E, Nicolaissen B, Berg KH, Smeringaiova I, Jirsova K, Collins AR. The comet assay applied to cells of the eye. Mutagenesis. 2018 Feb 24;33(1):21-24. doi: 10.1093/mutage/gex025. PubMed PMID: 29077953. (NFI, Progres, LM2015089). IF: 2.898
• Smeringaiova I, Reinstein Merjava S, Stranak Z, Studeny P, Bednar J, Jirsova K. Endothelial Wound Repair of the Organ-Cultured Porcine Corneas. Curr Eye Res. 2018 Jul;43(7):856-865. doi: 10.1080/02713683.2018.1458883. Epub 2018 Apr 13. PMID: 29648937. (NFI, Progres, BBMRI-CZ III, EF16_013/0001674) IF: 1.672
• Brejchova K, Trosan P, Studeny P, Skalicka P, Utheim TP, Bednar J, Jirsova K. Characterization and comparison of human limbal explant cultures grown under defined and xeno-free conditions. Exp Eye Res. 2018 Nov;176:20-28. doi: 10.1016/j.exer.2018.06.019. Epub 2018 Jun 19. PMID: 29928900. (LM2015089) IF: 1.330
• Smeringaiova I, Nyc O, Trosan P, Spatenka J, Burkert J, Bednar J, Jirsova K. Antimicrobial efficiency and stability of two decontamination solutions. Cell Tissue Bank. 2018 Dec;19(4):581-589. doi: 10.1007/s10561-018-9707-0. Epub 2018 Jul 30. PMID: 30062597. (BBMRI-CZ III, EF16_013/0001674, Progres-Q26/LF1 and by SVV, Project 260367/2017) IF: 97
• Sobotka R, Capoun O, Hanus T, Zima T, Kalousova M, Soukup V. The importance of serum osteopontin and stanniocalcin-1 in renal cell carcinoma. Neoplasma. 2018 Nov 15;65(6):958-964. doi: 10.4149/neo_2018_171123N759. Epub 2018 Jun 18. PMID: 29940774. (BBMRI-CZ III, EF16_013/0001674) IF: 771
• Soukup V, Čapoun O, Pešl M, Sobotka R, Vávřová L, Hanuš T, Zima T, Kalousová M. Placental Growth Factor in Bladder Cancer Compared to the Diagnostic Accuracy and Prognostic Performance of Vascular Endothelial Growth Factor A. Anticancer Res. 2018 Jan;38(1):239-246. doi: 10.21873/anticanres.12213. PMID: 29277778. (LM2015089, BBMRI-CZ III, EF16_013/0001674) IF: 1.830
• Hajkova N, Hojny J, Nemejcova K, Dundr P, Ulrych J, Jirsova K, Glezgova J, Ticha I. Germline mutation in the TP53 gene in uveal melanoma. Sci Rep. 2018 May 16;8(1):7618. doi: 10.1038/s41598-018-26040-0. PMID: 29769598; PMCID: PMC5955881. (ISSN: 2045-2322, NATURE PUBLISHING GROUP). (LM2015089, BBMRI-CZ III, EF16_013/0001674) IF: 4.259
• Bártů, P. Dundr, K. Němejcová, I. Tichá, H. Hojný, N. Hájková. The Role of HNF1B in Tumorigenesis of Solid Tumours: a Review of Current knowledge (HNF1B / tumorigenesis / immunohistochemistry). Folia Biol (Praha). 2018;64(3):71-83. Review. PubMed PMID: 30394265. (BBMRI-CZ III, EF16_013/0001674) IF: 1.073

2017

• Kalousová M, Levová K, Kuběna AA, Jáchymová M, Franková V, Zima T. Comparison of NA isolation using salting-out procedure and automated isolation (MagNA system). Prep Biochem Biotechnol. Aug 9;47(7):703-708. doi: 10.1080/10826068.2017.1303613. Epub 2017 Mar 9. PMID: 28277822. PMID: 28277822. LM2015089 IF 1.114
• Němejcová K, Rosmusová J, Bártů M, Důra M, Tichá I, Dundr P.Expression of Glut-1 in Normal Endometrium and Endometrial Lesions: Analysis of 336 Cases. Int J Surg Pathol. 2017 Aug;25(5):389-396. doi: 10.1177/1066896916683510. Epub 2016 Dec 18. PubMed PMID: 28381136. LM2015089 IF 0,830
• Dundr P, Němejcová K, Laco J, Skálová H, Bauerová L, Matěj R, Fischerová D. Anastomosing Hemangioma of the Ovary: A Clinicopathological Study of Six Cases with Stromal Luteinization. Pathol Oncol Res. 2017 Oct;23(4):717-722. doi: 10.1007/s12253-016-0186-y. Epub 2017 Jan 3. PubMed PMID: 28050796. LM 2010004 BBMRI_CZ, LM2015089 IF 1.736
• Viktor Soukup, Otakar Čapoun, Michael Peš, Roman Sobotka, Lucie Vávřová, Tomáš Hanuš, Tomáš Zima, Marta Kalousová. Placental Growth Factor in Bladder Cancer Compared to the Diagnostic Accuracy and Prognostic Performance of Vascular Endothelial Growth Factor A. Anticancer Res. 2018 Jan;38(1):239-246. PubMed PMID: 29277778. LM2015089 IF 2017:1.94
• Sobotka R, Čapoun O, Kalousová M, Hanuš T, Zima T, Koštířová M, Soukup V. Prognostic Importance of Vitamins A, E and Retinol-binding Protein 4 in Renal Cell Carcinoma Patients. Anticancer Res. 2017 Jul;37(7):3801-3806. doi: 10.21873/anticanres.11757. PMID: 28668878. GAUK 135115, BBMRI-CZ LM2015089, MH CR DRO VFN64165; SVV 2002064-2016 IF 1.895

2016

• Dudakova L, Palos M, Jirsova K, Skalicka P, Dundr P, Liskova P. Novel TGFBI mutation p.(Leu558Arg) in a lattice corneal dystrophy patient. Ophthalmic Genet. 2016 Dec;37(4):473-474. doi: 10.3109/13816810.2015.1126615. Epub 2016 Mar 30. PMID: 27028151. LM 2010004 BBMRI_CZ IF 1.445
• Němejcová K, Tichá I, Kleiblová P, Bártů M, Cibula D, Jirsová K, Dundr P. Expression, Epigenetic and Genetic Changes of HNF1B in Endometrial Lesions. Pathol Oncol Res. 2016 Jul;22(3):523-30. doi: 10.1007/s12253-015-0037-2. Epub 2015 Dec 19. PubMed PMID: 26685938. LM 2010004 BBMRI_CZ IF 1.855
• Rybickova I, Vesela V, Fales I, Skalicka P, Jirsova K. Apoptosis of conjunctival epithelial cells before and after the application of autologous serum eye drops in severe dry eye disease. Biomed Pap Med Fac Univ Palacky Olomouc Czech Repub. 2016 Jun;160(2):271-5. doi: 10.5507/bp.2016.001. PubMed PMID: 26927466. LM 2010004 BBMRI_CZ IF 1.24
• Cuppens T, Annibali D, Coosemans A, Trovik J, Ter Haar N, Colas E, Garcia-Jimenez A, Van de Vijver K, Kruitwagen RP, Brinkhuis M, Zikan M, Dundr P, Huvila J, Carpén O, Haybaeck J, Moinfar F, Salvesen HB, Stukan M, Mestdagh C, Zweemer RP, Massuger LF, Mallmann MR, Wardelmann E, Mints M, Verbist G, Thomas D, Gommé E, Hermans E, Moerman P, Bosse T, Amant F. Potential Targets' Analysis Reveals Dual PI3K/mTOR Pathway Inhibition as a Promising Therapeutic Strategy for Uterine Leiomyosarcomas-an ENITEC Group Initiative. Clin Cancer Res. 2017 Mar 1;23(5):1274-1285. doi: 10.1158/1078-0432.CCR-16-2149. PMID: 28232476. LM 2010004 BBMRI_CZ IF 8,738

2015

• Croce S, Ribeiro A, Brulard C, Noel JC, Amant F, Stoeckle E, Devouassoux-Shisheborah M, Floquet A, Arnould L, Guyon F, Mishellany F, Garbay D, Cuppens T, Zikan M, Leroux A, Frouin E, Duvillard P, Terrier P, Farre I, Valo I, MacGrogan GM, Chibon F. Uterine smooth muscle tumor analysis by comparative genomic hybridization: a useful diagnostic tool in challenging lesions. Mod Pathol. 2015 Jul;28(7):1001-10. doi: 10.1038/modpathol.2015.3. Epub 2015 May 1. PubMed PMID: 25932961. LM 2010004 BBMRI_CZ IF 6.187
• Němejcová K, Kenny SL, Laco J, Škapa P, Staněk L, Zikán M, Kleiblová P, McCluggage WG, Dundr P.Atypical Polypoid Adenomyoma of the Uterus: An Immunohistochemical and Molecular Study of 21 Cases. Am J Surg Pathol. 2015 Aug;39(8):1148-55. doi: 10.1097/PAS.0000000000000428. PubMed PMID: 25828387. LM 2010004 BBMRI_CZ IF 5,145
• Němejcová K, Cibula D, Dundr P.Expression of HNF-1β in cervical carcinomas: an immunohistochemical study of 155 cases. Diagn Pathol. 2015 Mar 25;10:8. doi: 10.1186/s13000-015-0245-9. PubMed PMID: 25884453; PubMed Central PMCID: PMC4428247. LM 2010004 BBMRI_CZ IF 2,597
• Franková V, Jirsová K, Zima T.The Bank of Biological Material (BBM) of the First Faculty of Medicine of Charles University in Prague, Czech Republic. Biopreserv Biobank. 2015 Aug;13(4):299-300. doi: 10.1089/bio.2015.29014.vf. PubMed PMID: 26280504. LM 2010004 BBMRI_CZ IF 1.340
• Dudakova L, Sasaki T, Liskova P, Palos M, Jirsova K.The presence of lysyl oxidase-like enzymes in human control and keratoconic corneas. Histol Histopathol. 2016 Jan;31(1):63-71. doi: 10.14670/HH-11-649. Epub 2015 Jul 28. PubMed PMID: 26218558. LM 2010004 BBMRI_CZ IF 2.096

2014

• Bauerová L, Dundr P, Fischerová D, Pešl M, Zikán M, Burgetová A. Ovarian metastasis of clear cell renal cell carcinoma: A case report. Can Urol Assoc J. 2014 Mar-Apr;8(3-4):E188-92. doi: 10.5489/cuaj.1456. PubMed PMID: 24678363; PubMed Central PMCID: PMC3956843. IF 1,657 LM 2010004 BBMRI_CZ
• Staněk L, Rozkoš T, Laco J, Ryška A, Petruželka L, Důra M, Dundr P.Comparison of immunohistochemistry, four in situ hybridization methods and quantitative polymerase chain reaction for the molecular diagnosis of HER2 status in gastric cancer: a study of 55 cases. Mol Med Rep. 2014 Nov;10(5):2669-74. doi: 10.3892/mmr.2014.2530. Epub 2014 Sep 2. PubMed PMID: 25189406. IF 1,554 LM 2010004 BBMRI_CZ
• Jirsová K, Zima T. Spolupracujte s námi na vzniku sítě Biobank. Křižovatka, čtvrtletníkk VFN a 1. LF UK, č. 4, prosinec 2014. LM 2010004 BBMRI_CZ
• Greplova K., Valik D., Holub P., Knoflickova D., Nenutil R., Hajduch M., Zima T., Jirsova K., Ryska A.: Impact of innovative practices in Europe – the Czech experience. Clinical chemistry and laboratory medicine. 2014, 52(4), Th134, eA358, RECAMO:CZ 1.05/2.1.00/03.0101; BBMRI:LM2010004

2013

• Micera A, Jirsova K, Normando EM, Stampachiacchiere B, Esposito G, Lambiase A, Bonini S. Molecular and biochemical expression of TLRs in human amniotic membrane: a comparative study of fresh and cryopreserved specimens. Graefes Arch Clin Exp Ophthalmol. 2014 Feb;252(2):267-74. doi: 10.1007/s00417-013-2540-z. Epub 2013 Dec 12. PMID: 24337432. IF 1,908 LM 2010004 BBMRI_CZ
• Springer D., Valík D., Topolčan O., Nekulová M., Zdražilová-Dubská L., Malbohan I., Fuchsová R., Svobodová Š., Zima T.: Nádorové markery v klinické praxi. Postgraduální medicína. 2013,15, příloha č. 3, s.40-49. BBMRI_CZ, LM 2010004; REMACO CZ. 1.05/2.100/03.0101; MZČR RVO-VFN64165

2012

• Kalousová M, Krechler T, Jáchymová M, Kuběna AA, Zák A, Zima T. Ferritin as an independent mortality predictor in patients with pancreas cancer. Results of a pilot study. Tumour Biol. 2012 Oct;33(5):1695-700. doi: 10.1007/s13277-012-0426-z. Epub 2012 Aug 10. PubMed PMID: 22875781. IF: 2,14 (2011) LM 2010004 BBMRI_CZ